Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908388.1_cds_XP_016458501.1_52123
CDS Infomation

[gene=LOC107782171] [db_xref=GeneID:107782171] [protein=uncharacterized protein LOC107782171 isoform X2] [protein_id=XP_016458501.1] [location=complement(join(289443..289691,290153..290293,290773..290822,290947..291058,291205..291772,291993..292132,292228..292281,292980..293223,293333..293432,293811..293865,294019..294747))] [gbkey=CDS]
Sequence

ATGGAAAGTGACGACGATTATCAGTCCTCCCCGTTGCCGGAGGAGGCTTCGCCGGAGATC
CGACGTCCTAGATTCAAGCGTTTGAAGAAAGCTCTAGAAGCTTCCAAAAATCGACATGCT
CCCCCAACTATGCCAATAGACGAAGTGTTTGGCTTTCCTAAGGTTGATTTTGCCAAATTG
GAAGCTCTAGAAGCTTCCAAAACCCTAGAAGAAGATTCTGCTGATTCAACTGAACTTGTA
TCATCATCACAGGGCAGCGAGGATGAGACAAGATCTGAGTTTGGCTTTAACGAAAAGGGT
GGAGAGAGTAGGGAAGAATTGGAAGCCTTAGAAGCTTCTAGAACCCAGGAAGATTCTGCT
GATTCAACTGAACTCGTGTCACCACACAATAGCGAGGATGAAAAGGGCTGTGAGGATGTT
CTCGTTTCTAGCGAGCAGAGCAAAGAGGTTAAAAGATTTCTAGATTTTGGTGAGGATGAT
GATCAGTCTCGTGGGAAAGAACATGAAACGAGTAGGGAAGTTGGGGAAGATTTGGAATCT
GGTGACGTGGTAAAGGAGATGGAGGATTTGGATATGGAGAAATTGGGAACACAACAAGAT
GTTGAAGGAGATGGGGATCTGAAGGAAGATGACAAAACGAAAAAGAAGAAGAAGAAGAGA
ACTAAAGGTGACATTGGTAGTGAAGTGAAGTCGAAAGAATTGGCTTTGAACAAAAGAAGA
GAAGCAAAGGAGAGAAAAATATTTCTTCAGCAGCTTCATGTTGATACTCAGCGACTATTG
CGAGAAAGTAAGGATGCAACATTTAAGCCTGTACCTGTTGTACATAAGCCTATATCCTCT
GTTTTGGAGAAGATTCGGAAAAGGAAGCTCGAGGTCTTGAAAAAGACCGGGATGCTAAAC
GGCAACAGTTCCATTCACAAGATTAGTGCTTCAAGTGAGGTTATGATGGAATTAGGTGCA
AAGAGCGCATATTCTGAAGAGCACAGAGTAGACAAACTGGACATAGAGTTGGAAGAGAAG
GTGGATGTAAATGGCATAGAAACGGATAGGACTACAGATACCTCTAATATTGATGGAATT
TCGGTATCTCCAATTACTAGAAGCAGCGAGATTGCTCCTGATCAAACGGCTTTGGAAGAA
AGGCCTAACTCTGTATTTAGAGCTCCAGTTGATGACACTCAGGATCTATTTGATGACTCT
GAACGAACAGGCAGTAAGGAGGAGATGCTTGATGACCCGGCCTCTAGTCCTTTGGAAGAA
GTAATGGCACCATCTCTCCTTGCTTTGAACTTGAAGTTCGATTCTGCCCCTCCAGATGAA
AGTTCCTCAGATGAGGAGGACAATGACAAGGAGAATATAAATCCATATACAAAAGAAGGT
GGTGATGGCTGCAGTTCTCCAAAGGGAGACCCAGTTAAAGCATTTGTTGATGATGAAGCG
GAGGAAGAAGATGACAGTGATAATGACCTATTACGGTTCGGTGATGAAGAAGACGAAGAT
ATTGATGATTCTGCTGAACTCCACGATATTATTGCCACTGATTACAAAGAAAAGCCAGTT
GATAAAGAAAAGCGGAATGAACTTCATCAAAAGTGGCTTGAGCAGCAGGATGCAGCTGGA
ACTGAGAATTTGCTGCAACGGTTAAAATGTGGTGTAGAACAAAAGGAGACAATGTTGGTC
GATGATGAACTAGAAAGCGATGAGTGTGATGAAGACGTCAATAATATCACTGACATGGAT
GCAATTCCTAAAAGTTCTGCTCGACTAAATTCAAAAAGGGCAAAGCAAATAATAATGCAG
ATGTTTGTGGATAAAGATGACGTTTACTTATCTGATGAAGATGAGGAAACTGAAAAGAGG
CTTGTAAAGCAGCGCATGCTATATAACTCTGAGCCGACAACAGTAGTATCGCCTATTGAG
GATGAAAGCTCCAGTGAGTTATTTGGACTTATAAAGAAGCTTAATACTGTACCTGACAAT
AAGAGAAAAGCAAAAGCATCCTCGTTCTTTGATACAGTGCTAGGGAATCAAAAGAAGAAA
AGCTCTCTGAAGTCCTCTTTTCTTGGACGAGTTACAAATCATCTTCCATCGTCCCATAAA
CAAAGTTCAACCATAGTTCGTTCTTTCATCTTTGGACGGGATGACAGCAATAGCCGAAGC
TCAATGTCAATGTCAGAGGATTCTTCAGATATGATCGTGAAAGAAAACCTTCCAATCAGG
AATAGTACAACAAAGTTTGGTAATTTCCAAGCCAAATCAAGCAGCCAAGGTAAAAATGCT
GCTGCGGGAACATCAGCTGCTGCTCCCTCATTTGATATATTAAAGCGATCTTCAGCACCA
TCTAACGTTTGTTCTCGAGATGTTTTGCTTGACCTTCCTAAACCTCTCCTTGCTGATCTT
AGAGTTTCAAAGAGGTCACTAAAGGCAGAAGGAAAAAGATAG

Peptide Sequence

PEP ID

XP_016458501.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107782171 isoform X2 [Nicotiana tabacum]
Sequence

MESDDDYQSSPLPEEASPEIRRPRFKRLKKALEASKNRHAPPTMPIDEVFGFPKVDFAKL
EALEASKTLEEDSADSTELVSSSQGSEDETRSEFGFNEKGGESREELEALEASRTQEDSA
DSTELVSPHNSEDEKGCEDVLVSSEQSKEVKRFLDFGEDDDQSRGKEHETSREVGEDLES
GDVVKEMEDLDMEKLGTQQDVEGDGDLKEDDKTKKKKKKRTKGDIGSEVKSKELALNKRR
EAKERKIFLQQLHVDTQRLLRESKDATFKPVPVVHKPISSVLEKIRKRKLEVLKKTGMLN
GNSSIHKISASSEVMMELGAKSAYSEEHRVDKLDIELEEKVDVNGIETDRTTDTSNIDGI
SVSPITRSSEIAPDQTALEERPNSVFRAPVDDTQDLFDDSERTGSKEEMLDDPASSPLEE
VMAPSLLALNLKFDSAPPDESSSDEEDNDKENINPYTKEGGDGCSSPKGDPVKAFVDDEA
EEEDDSDNDLLRFGDEEDEDIDDSAELHDIIATDYKEKPVDKEKRNELHQKWLEQQDAAG
TENLLQRLKCGVEQKETMLVDDELESDECDEDVNNITDMDAIPKSSARLNSKRAKQIIMQ
MFVDKDDVYLSDEDEETEKRLVKQRMLYNSEPTTVVSPIEDESSSELFGLIKKLNTVPDN
KRKAKASSFFDTVLGNQKKKSSLKSSFLGRVTNHLPSSHKQSSTIVRSFIFGRDDSNSRS
SMSMSEDSSDMIVKENLPIRNSTTKFGNFQAKSSSQGKNAAAGTSAAAPSFDILKRSSAP
SNVCSRDVLLDLPKPLLADLRVSKRSLKAEGKR

Transcript Sequence

Gene sequence data has not been registered.